Sorry but I claimed success too quickly. With everything I did the vibrations are much less, but my brakes are still dragging. I took a long drive today and it seems to get more noticeable after it warms up. The fronts are hot and they have fresh brake dust. Since the fronts engage first this makes sense. But I never adjusted anything linkage wise, I just replaced the master cylinder when it was leaking. The other stuff I replaced such as calipers, rotors and flex lines were after the issue became apparent to me. Being that I had two new brake master cylinders on it, I do not think that is the issue. Brake fluid flowed freely through the lines when bleeding so I do not think there is a blockage.
I am really stumped.