I have also looked at putting those style of stripes on my 2024 TRD OFFROAD. I would like to cut-out for the TRD OFFROAD emblems on the sail panels and leave the emblems in place. Being a retired body shop mgr. and have knowledge of decal installs and have done many for myself and friends I see this as not a problem to custom cut and fit around the emblems. In your case and your model, a 4th Gen by looking at the picture I would think the 5th Gen stripes would fit your vehicle, not saying they will, but a quick measurement of the distances between the doors should give you your answer. There is seller on eBay that sells these stripe kits, just type in 40th anniversary strips for the Toyota 4 Runner. I would have no problem is doing the stripes, but I have installed many stripes, etc., and have no problem in doing it for a professional look, that's the only way I would have it.
Decals for Toyota 4Runner 5th Gen - 40th Anniversary Edition Inspired Graphics | eBay