Just an update, Progressive replaced the windshield with an OEM Toyota stamped one, installed by Safelite at zero cost and hastle. I was ready to put on a fight when I called progressive/safelite to request OEM glass and they said "okay, no problem. will submit that request"
Work by Safelite was decent, there was some scuff marks that came off with a paint polisher/sealant. The trim was a little popped up on one side but I was able to push that down into it's place. Haven't washed the car so not sure about leaks.. I plan on washing the car tomorrow