JB,
The rear diff locker problem on FJ has
apparently been fixed. It was
apparently due to a bad batch...a BIG batch! However, I would still not put on big ass tires nor abuse it off-road.
EH007,
ATRAC was available on 2001-2002 3rd gen 4runners. 4th gen 4runners came out in 2003.
mtw290,
A center differential is a good thing. A center differential like the one in the 4runner (Torsen T-3) allows the 4runner to run 4wd on dry pavement (aka on-road use, not just off-road). Your old 1998 4runner could not be in 4wd on dry land. Your '98 system was called, "part-time 4wd" system. So, your '06 4runner allows you to use 4wd for on-road use (when it rains, snows, or on dry land).
As noted above, from 2001 and up till now, 4runners have ATRAC plus center diff lock. Center diff lock allows for equal distribution of power front and rear while off-roading (similar to when you put your 1998 in 4wd mode).
ATRAC is traction control that allows for shifting of power back and forth between tires on the SAME axle, despending on which has more traction. ATRAC is equal to having limited-slip differential on your front AND rear axles. It is an effective system for the most part.
Is your 2006 4runner as effective off-road as your 1998 4runner with rear locker? Under most conditions, it should be just as good...with less headache because you don't have to always remember to turn OFF your rear locker during off-roading. Now, if you do a lot of rockcrawling or blasting through mud/sand dunes, then your 1998 4runner may hold an advantage...but it is not nearly as much as you imagine. Go out and play with your new 4runner and then come back and tell us!
The nice thing to remember is that you can always upgrade your 2006 4runner with a rear locker (ARB for instance). That would be the ultimate upgrade IMHO because it gives you a center diff locker PLUS a rear locker PLUS ATRAC controlling your front axle. And, under the grand scheme of things, this upgrade is fairly economical. Can you say the same thing about your 1998?? ATRAC is something that cannot be retrofitted into older 4runners.
BTW, ATRAC works in 4-lo and 4-hi. Your 1998 locker only worked in 4-lo (unless you modified it).
Hope this helps.