[MENTION=160790]totallypro[/MENTION] Could you post pictures of the final product if/when you decide to take the flares off? I have an '01 with SR5 color matched flares and think it'd probably look better without them on, but I'm afraid that I'll have a bunch of ugly holes all on the body and don't want that. I'm torn.
Sorry it took so long but I've got some pictures. What you are describing sounds like the limited body cladding, not what I had. I had the really thin (maybe 3-4 inches tall) black and chrome flares. These were only mounted with screwed within the wheel well, yours MIGHT have other mountain holes on the body, I just don't know.
As far as these ones go, I love the look without them. It makes the tires stick out of the body just ever so slightly, like an inch or two, and gives it a much meaner look. To me it looks a little more badass, almost like I gave it a little lift and some small wheel spacers.
As far as holes in the body, the fronts have nothing noticeable. The bolts there are also used for holding the lining in, so they are all tucked up underneath, you'll never be able to tell they were there. The backs, however, leave a bunch of small screw heads and plastic clips sticking out. They're small and honestly I think I'll just leave them. I could take them out and put the clips out but then there will be small holes there isntead. They would be easy to patch if I had touch up paint, but the screw heads are small enough I'll just leave them.
Edit: Of course the pictures don't work! I'm trying to get them fixed
Another Edit: Now they do work! Click on them for a larger resolution
If you want any more specific pictures just ask.