Well, since you pretty much copied the wiring diagram that I created & posted, I guess I'll go ahead and answer your question.
Judging by your diagram, you have taken the (IG) terminal on the ECU (black & white according to your diagram, mine was black/yellow), fused it at 20A and connected it to a ground point (battery negative terminal per your diagram).
You may have been confused by the way I drew my diagram (see below) as I have the (IG) terminal going to the battery, and I can see how it could appear that I'm trying to show it connecting to the negative terminal, however, the (IG) terminal should be connected to a 12V+ source. I thought that was made clear by the fact that the lead is fused (why fuse a ground lead?), and drawn in red, and the battery is labeled underneath as "12V power". Either way, I think that's your problem.
For a look at the factory diagrams, check out the E-locker links / diagrams / info post in my build thread...
http://www.toyota-4runner.org/3rd-g...one-2001-sport-ed-trd-scd-27.html#post1038490