On my 2000 4runner I have a 2.5 or so lift and am doing the front CV axles right now and notices the sway bar bushings and endlinks are toasted... Should I be running slightly longer front and rear endlinks with this 2"ish lift?
It won't hurt to have longer links. With a 2" lift you might be OK with stock links. Check out the rear, and see how parallel your sway bar is to the LCA.
If you need some let me know. There's a link in my sig.