When you replaced the thermostat did you let the engine run with the rad cap off, front jacked in air a bit and the heater on full blast? You need to do this until the truck gets to temp, then the coolant will flow through everything and any air pockets will burp out of the open radiator cap. Once the truck gets to operating temp and the thermostat opens you can top it off in the rad, close it, top it off in the reservoir and you should be good. Forgive me if this is how you have done it but figured it was worth a shot with what little info you have given.