Did you resolve the 4Runner issue? I’m having the same identical problem. Any help will be greatly appreciated.
I am also having the same exact problem with me 2006 SR5. Key fob does not work, ac fan and clock stay on when key is removed as well as rear wiper will occasionally stay on only after key is removed. Already tried disconnecting my battery and putting a new battery in and neither fixed the issue. I presumed it was my ignition switch until the rear wiper started today. Any help is appreciated, really hoping it’s not the body control module.