To all the Anti-Jeepers.........please know your facts if you're gonna offer advice to someone asking a genuine question (don't read into this statement, I'm not attacking anyone and my statement isn't to instigate a web fight).
I've been a Jeep owner (4 Jeep's total, CJ, YJ, 2 TJs) since 2001 and Jeep hold their own and then some in the category they belong in, which is "offroad" vice daily driver that is "occasionally offroad". People who buy Jeeps buy them for the appeal (convertible off road/beach cruiser) with a decent portion being hard core wheelers. You don't see very many stock Jeeps on the road, almost all have upgraded wheels or something cosmetically. I've now owned two 4Runners and 4 Jeeps and I can tell you that a stock Jeep will outperform a stock 4Runner on any given day, and a modified Jeep will destroy a modified 4Runner on any given day. In short, solid axles make a huge difference. Now.....before some of you get your panties in a bunch thinking I'm bashing Toyota as a non-wheeler, let me explain my logic.
1. Jeeps were built with off-road as the primary mission (built for WWII-1940's)
2. Jeep has more aftermarket accessories then any other vehicle brand
3. Jeep has a greater following than any other brand (very loyal customers)
4. Jeeps have a higher resale value (they shouldn't, but they do)
With that said........any vehicle can be great with the right modifications added aftermarket, but Jeeps come well equipped out of the box (especially the Rubicon models). The biggest complaint of most Jeep owners is the uncomfortable ride on the long hauls (you have to make compromises somewhere right).
The new JK's (2007-2011) have made leaps and bounds in the arena of comfort, but they still have a long way to go (longer wheelbase, better coil suspension, better seats). 2011 introduced the new interior (significant upgrade) and 2012 will introduce the new Pentastar engine with 290 horsepower and 260 pound-feet of torque, which will finally provide the JK Wrangler enough power to get out of it's own way. The current 3.7L engine on the 07-10's is severely underpowered (It's the Chrysler Minivan engine) hence why most people on this thread commented on it in a negative manner, and rightfully so.
Anyway, to the OP (original poster) you should weigh your options carefully and visit forums from all 3 vehicles you're interested in. Below are some great Jeep websites and FJ websites. Each forum is going to be loyal to their brand, so if you visit a FJ site, they are gonna rave about the FJ, same for a Jeep forum, they're gonna rave about Jeeps. Both of those forums will argue why the other is inferior to what they own...........again, loyalty to brand/model:
Jeep Forums:
JK-Forum.com - The Ultimate Jeep JK Wrangler Bulletin Board (specific to JK's only)
www.jeepsunlimted.com (they have a JK specific section)
Jeep Forum - Jeep Enthusiast Network (they have a JK specific section)
FJ Cruiser Forums:
Toyota FJ Cruiser Community
SoCal FJ Cruiser Forums - Home
FJ Cruiser Home
Hope this helps. If anyone wants to have a sidebar PM me......:thanks: