Hello all,
Exact same thing happened to me. I purchased a 2016 4Runner TRD Pro last month (May). I spoke to Baja Rack direct, to confirm proper mounting to my new 4Runner. It was explained to me that "the brackets kind of float in the channel". Once I received the rack, I was slightly perplexed, because the brackets didn't seem to float at all. However, there is a certain amount of trust when purchasing a product that comes with such stellar reviews. So, not being an engineer, and confident after speaking to Baja Rack direct, I proceeded with the install. I followed the directions exactly, and once everything was in place, I snugged it all down. Now here is the reason the damage is easily missed; when snugging down the rack, you are standing just below the roof line (on the perimeter of the vehicle), so you are watching the outer rail. From that point, everything looks good. But by the time you are finished, the bracket is bending inwards (toward the inner roof) and caving it in. So like others before me, by the time you see what's happening, the damage is done! I don't even have license plates on my TRD yet, but I do have major roof/body damage at 4 locations. After searching the web, and finding this same issue on multiple websites, I see that Baja Rack was FULLY AWARE of this problem, yet they sold me this product just two weeks ago. These are the exact ingredients of a class action law suit.
Meanwhile, since this damage is irreversible by me (and to keep my sanity), I removed the rack, added neoprene washers, stacked 3- 1/16" stainless washers at each location (for spacers), then put the rack back on. The question is, why am I doing a temp fix on a product that has been promised, and sold to me to be correct, and fully functional, if the directions are followed? The TRUTH about Baja Rack needs to be disseminated, and, Baja Rack needs to step up and pay for every vehicle that they have damaged due to their faulty design.