Where did you get the hydraulic pump kit and how much did it cost? I managed to dump the fluid from the lower KDSS chamber on my garage floor this evening when I attempted to do the system calibration (and misread the diagram showing to back the shutter valve bolts off 10-12 mm -- I was trying to back off 10-12mm of threads which is, of course, not what the instructions say...). Guess that's what I get for trying to skim the instructions and rush the task before heading out to run some errands after work.
Anyway, a year after this thread was originally started and my local Toyota Dealer still doesn't have the SST high pressure pump required to do the KDSS system bleeding service (and they don't have the fluid either). Gonna call the local Lexus dealer in the morning...
What was supposed to be a quick (and free) job is probably going to cost me $100. Hooray for me!